STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_1430Hypothetical protein. (371 aa)    
Predicted Functional Partners:
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
    
 0.767
Lgra_1431
Hypothetical protein.
 
     0.766
gpmA
Phosphoglycerate mutase.
    
  0.637
birA
biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
  
    0.622
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family.
       0.527
Lgra_1551
Saframycin Mx1 synthetase B.
   
 0.512
rbbA
Putative fused transporter subunits of ABC superfamily: ATP-binding component.
  
  
 0.509
Lgra_1888
Alpha/beta hydrolase family protein.
  
     0.438
fadH
2,4-dienoyl-CoA reductase.
    
 0.433
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: low (22%) [HD]