STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_1548Fatty acid hydroxylase superfamily protein. (201 aa)    
Predicted Functional Partners:
Lgra_1546
Fatty acid desaturase.
 
 
 0.814
fabG_6
Polysaccharide biosynthesis dehydrogenase/reductase.
  
    0.778
Lgra_1550
PAP2 superfamily protein.
   
  0.592
bmrU
Diacylglycerol kinase.
   
  0.505
ptlI
Pentalenene oxygenase.
   
 0.473
Lgra_1675
Hypothetical protein.
   
 0.457
Lgra_1549
Cytochrome oxidase-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.456
hmp
Oxidoreductase, FAD-binding protein.
   
 
  0.422
Lgra_1495
3-beta-hydroxysteroid dehydrogenase/isomerase.
  
  0.420
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.