STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
macA_2Hemolysin D. (295 aa)    
Predicted Functional Partners:
Lgra_1564
FtsX-like permease family protein.
 
    0.967
ttgC_2
Multidrug efflux MFS outer membrane protein.
 
   0.941
lolD_2-2
ABC transporter ATP binding protein.
  
  
 0.793
tolC
Outer membrane protein TolC.
  
 0.741
oprM
Outer membrane efflux protein.
  
   0.727
Lgra_1137
Outer membrane efflux protein.
  
  0.719
mdtA_1
Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.714
oprM_6
Outer membrane efflux protein.
  
   0.691
bepC
Agglutination protein.
   
  0.679
cebC
Chemiosmotic efflux system B protein C.
   
  0.679
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.