Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cbpMPutative chaperone-modulator protein CbpM. (104 aa)    
Predicted Functional Partners:
cbpA
DNA-binding protein DnaJ.
 
 
 0.979
Lgra_1836
Phospholipid binding protein.
       0.668
phbC_1
PHA synthase.
       0.648
ycdT
Diguanylate kinase.
    
  0.580
dosC_1
Regulatory protein (GGDEF, PAS, PAC domains).
    
 0.571
cyaA_3
Guanylate cyclase.
    
 0.562
Lgra_2964
Hypothetical protein.
  
     0.558
pta
Phosphate acetyl/butaryl transferase.
    
  0.552
Lgra_1838
Hypothetical protein.
 
     0.483
ftsB
Hypothetical protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
       0.470
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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