STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_1900Hypothetical protein; Belongs to the UPF0276 family. (287 aa)    
Predicted Functional Partners:
Lgra_1899
Hypothetical protein.
 
  
 0.996
Lgra_0352
Signal peptide protein.
 
  
 0.973
Lgra_1901
Silver efflux pump.
 
   
 0.903
Lgra_1951
TQO small subunit DoxD.
  
  
 0.671
Lgra_2657
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.651
rtxA-2
Structural toxin protein RtxA.
   
    0.580
Lgra_0777
O-methyltransferase.
   
    0.558
msrA_2
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.471
yceI_2
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.443
yceI
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.443
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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