STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arpAnkyrin repeat protein. (289 aa)    
Predicted Functional Partners:
Lgra_3363
Ankyrin.
  
     0.773
Lgra_3338
Ankyrin repeat protein.
  
     0.772
Lgra_2656
Ankyrin repeat-containing protein.
  
     0.718
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.669
Lgra_0454
Ankyrin repeat protein.
  
     0.666
Lgra_1580
Leucine Rich repeats (2 copies).
  
     0.479
Lgra_2421
Ras family protein.
 
 
   0.475
Lgra_1939
Hypothetical protein.
       0.450
Lgra_0135
Multidrug resistance ABC transporter ATP binding protein.
  
  
  0.436
Lgra_0246
tRNA modification GTPase TrmE.
  
 
   0.435
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.