STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_1962Acyltransferase. (399 aa)    
Predicted Functional Partners:
Lgra_1961
ABC transporter permease.
       0.763
gatA_1
Amidase.
       0.762
Lgra_2200
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
   
 0.735
Lgra_2381
Calcium-transporting ATPase.
  
     0.705
Lgra_2787
Ankyrin repeat protein.
  
     0.699
pknD
Serine/threonine protein kinase.
  
     0.693
pieE_2
Substrate of the Dot/Icm secretion system.
  
     0.690
Lgra_2360
Hypothetical protein.
  
     0.686
Lgra_1429
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.681
yeeA_1
Inner membrane protein.
  
     0.618
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.