STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lgra_1971Serine/threonine-protein kinase. (536 aa)    
Predicted Functional Partners:
arcB_3
Sensory histidine-kinase / response regulator.
  
  
 0.678
bvgS
Sensory box histidine kinase/response regulator.
  
  
 0.673
Lgra_0243
Hypothetical protein.
  
     0.640
gmr_2
Sensory box/GGDEF domain protein.
     
 0.610
letS
Legionella transmission sensor LetS.
     
 0.590
cyaA_3
Guanylate cyclase.
     
 0.574
Lgra_1193
Thaumatin domain-containing protein.
  
     0.566
Lgra_1972
Phosphatase.
       0.554
luxQ
Sensor histidine kinase.
  
 
 0.540
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.533
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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