STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
astDSuccinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (495 aa)    
Predicted Functional Partners:
astA
Arginine N-succinyltransferase, beta chain.
 
  
 0.966
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
  
 0.943
cpg2
Carboxypeptidase G2 and to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase.
 
  
  0.907
Lgra_2002
Spermidine synthase.
 
 
   0.793
putA
Bifunctional PutA protein (proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.741
Lgra_2195
acyl-CoA synthetase.
   
 0.686
pta
Phosphate acetyl/butaryl transferase.
  
 
 0.680
tycC_1
Non-ribosomal peptide synthase.
   
 0.672
Lgra_2054
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.666
pksJ_2
Polyketide synthase module; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.660
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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