STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2012FAD dependent oxidoreductase. (398 aa)    
Predicted Functional Partners:
Lgra_2013
Methyltransferase.
 
    0.936
Lgra_2014
Naringenin-chalcone synthase.
 
    0.833
Lgra_2195
acyl-CoA synthetase.
    
 0.689
lgrB_2
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.620
etfB
Electron transfer flavoprotein beta-subunit (Beta-ETF).
  
 
 0.589
Lgra_0544
Polyketide synthase.
    
 0.575
etfD
Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.560
tycC_1
Non-ribosomal peptide synthase.
    
 0.503
Lgra_0737
Secreted protein.
  
     0.466
etfA
Electron transfer flavoprotein, alpha subunit.
  
 
 0.453
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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