STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2016Hypothetical protein; Alpha-2-macroglobulin family N-terminal region. (1914 aa)    
Predicted Functional Partners:
pbpC
Penicillin binding protein 1C.
   
 0.968
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.643
Lgra_0738
Secreted protein.
  
     0.485
iraA
Small-molecule methyltransferase IraA.
  
     0.471
Lgra_1596
cNMP binding domain-containing protein.
  
     0.464
secA_3
Coiled-coil protein.
  
     0.461
Lgra_1137
Outer membrane efflux protein.
  
     0.457
Lgra_1838
Hypothetical protein.
  
     0.452
Lgra_0455
Ankyrin repeats (3 copies).
  
     0.431
Lgra_0604
IcmF.
  
    0.428
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.