Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yfiCN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the methyltransferase superfamily. (219 aa)    
Predicted Functional Partners:
kinE
Sensor histidine kinase.
  
     0.534
Lgra_2200
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
 
     0.533
gntT
H gluconate symporter.
  
     0.526
Lgra_1429
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.514
ybgC
acyl-CoA thioesterase.
       0.504
pieE_2
Substrate of the Dot/Icm secretion system.
  
     0.504
Lgra_1978
Mechanosensitive ion channel MscS.
 
     0.499
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.486
Lgra_2381
Calcium-transporting ATPase.
  
     0.486
rpoE
Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.
       0.479
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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