rpoE protein (Legionella gratiana) - STRING interaction network

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Known Interactions

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Predicted Interactions

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Score

rpoE

Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)

Predicted Functional Partners:

Lgra_2170

0.958

rpoB

0.938

rpoC

0.938

rpoA

0.931

cheR

0.925

rpoZ

0.924

fimV_1

0.792

topA

0.747

fimV_2-2

0.737

Lgra_2759

0.737

Your Current Organism:

Legionella gratiana

NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lgra_2170	rpoE	Lgra_2170	Lgra_2139	Coiled-coil protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.958
Lgra_2759	rpoE	Lgra_2759	Lgra_2139	Hypothetical protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.737
cheR	rpoE	Lgra_1444	Lgra_2139	Methyltransferase involved in chemotaxis (CheR domain).	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.925
fimV_1	rpoE	Lgra_1756	Lgra_2139	FimV protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.792
fimV_2-2	rpoE	Lgra_0509	Lgra_2139	Hypothetical protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.737
rpoA	rpoB	Lgra_0393	Lgra_0362	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	Lgra_0393	Lgra_0363	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoE	Lgra_0393	Lgra_2139	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.931
rpoA	rpoZ	Lgra_0393	Lgra_2972	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoA	topA	Lgra_0393	Lgra_0812	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.926
rpoB	rpoA	Lgra_0362	Lgra_0393	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	Lgra_0362	Lgra_0363	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoE	Lgra_0362	Lgra_2139	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.938
rpoB	rpoZ	Lgra_0362	Lgra_2972	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoC	rpoA	Lgra_0363	Lgra_0393	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	Lgra_0363	Lgra_0362	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoE	Lgra_0363	Lgra_2139	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.938
rpoC	rpoZ	Lgra_0363	Lgra_2972	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.996
rpoC	topA	Lgra_0363	Lgra_0812	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.816
rpoE	Lgra_2170	Lgra_2139	Lgra_2170	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	Coiled-coil protein.	0.958