STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
yueD_2Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase.
 
 
   0.869
hutI
Imidazolone-5-propionate hydrolase.
       0.842
Lgra_2189
OPT family oligopeptide transporter.
       0.842
Lgra_2195
acyl-CoA synthetase.
  
 0.820
ycdF
Short-chain dehydrogenases/reductases family protein.
  
     0.763
fabG_3
3-oxoacyl-ACP reductase.
  
  
  0.751
tycC_1
Non-ribosomal peptide synthase.
  
 0.750
Lgra_1551
Saframycin Mx1 synthetase B.
  
 0.747
Lgra_0544
Polyketide synthase.
  
 0.736
phaB_2
Pteridine reductase.
  
     0.720
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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