Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lgra_2226Polysaccharide deacetylase domain-containing protein. (325 aa)    
Predicted Functional Partners:
Lgra_2942
Dolichyl-phosphate mannosyltransferase.
  
 
 0.651
Lgra_2223
Tfp pilus assembly protein PilW.
       0.644
Lgra_2224
Pre-pilin leader sequence (pilV).
       0.644
dotG
IcmE/DotG protein.
  
     0.612
Lgra_2377
Putative virulence protein.
  
     0.562
Lgra_2182
Enhanced entry protein EnhA.
  
     0.545
ankH
Ankyrin repeat-containing protein H.
  
     0.528
Lgra_1633
Integral membrane protein (PIN domain superfamily).
  
     0.520
Lgra_3242
Hypothetical protein.
  
     0.516
ydgA
Putative membrane protein YdgA-like protein.
  
     0.515
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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