STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
proP_2Major facilitator family transporter. (427 aa)    
Predicted Functional Partners:
rihA
Inosine-uridine preferring nucleoside hydrolase; Belongs to the IUNH family.
 
     0.862
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.686
xylA
Xylene monooxygenase.
  
  
 0.653
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.624
hmp
Oxidoreductase, FAD-binding protein.
     
 0.610
Lgra_2246
Phytanoyl-CoA dioxygenase.
       0.580
ywtG_2
D-xylose proton symporter.
  
  
  0.527
Lgra_0664
CMP-N-acetylneuraminate monooxygenase.
  
 
 0.438
shiA
Shikimate transporter.
 
  
0.419
ndoA
Dioxygenase, ferredoxin subunit.
  
 
 0.419
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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