Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cphBCyanophycinase; Belongs to the peptidase S51 family. (288 aa)    
Predicted Functional Partners:
cphA_2
Cyanophycin synthetase.
 
   
 0.970
iaaA
Isoaspartyl dipeptidase with L-asparaginase activity.
 
  
 0.941
cphA_1
Cyanophycin synthetase.
 
   
 0.839
cphA_3
Cyanophycin synthetase.
 
   
 0.839
lysAC
Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
  0.622
Lgra_2265
PRC-barrel domain protein.
  
    0.491
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.420
asg
L-asparaginase I.
     
  0.420
Lgra_1368
Amino acid racemase.
     
  0.420
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.420
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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