STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2278Recombinase B. (846 aa)    
Predicted Functional Partners:
addA
UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.997
ohrB
Organic hydroperoxide resistance protein.
   
    0.593
Lgra_1173
Coiled-coil protein.
  
     0.525
Lgra_2279
Hypothetical protein.
       0.508
Lgra_2277
Hypothetical protein.
       0.502
Lgra_2721
Protein IcmB (DotO).
  
     0.489
Lgra_2290
Sporulation domain-containing protein.
 
     0.427
yiaD
Lipoprotein.
 
     0.417
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.