STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2344Hypothetical protein; C-terminal part of DNA polymerase, bacteriophage-type. (211 aa)    
Predicted Functional Partners:
ssb
Single-strand binding protein (SSB) (Helix-destabilizing protein).
    
   0.727
ssb_1
Single-strand DNA-binding protein.
    
   0.638
Lgra_1995
uracil-DNA glycosylase.
     
 0.608
Lgra_2491
Glycoprotease.
  
    0.591
envC
Peptidase, M23 family.
   
   0.551
mltD
Membrane-bound lytic murein transglycosylase D.
   
   0.482
moeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
  
  
 0.481
Lgra_1860
2-nitropropane dioxygenase.
    
  0.431
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.