Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yiaV_1Hemolysin D. (337 aa)    
Predicted Functional Partners:
oprM_2
Outer membrane efflux protein.
 
 
 0.913
yeeA_2
Inner membrane protein.
  
  
 0.799
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 
 0.796
emrB_1
Multidrug resistance protein, MFS superfamily.
  
   0.790
hsrA_1
Multidrug efflux protein; Belongs to the major facilitator superfamily.
  
 
 0.560
hsrA_2
Transporter of the major facilitator superfamily (MFS).
  
 
 0.546
lmxE
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.514
ttgC_1
Outer membrane efflux protein.
  
   0.508
oprM_3
Outer membrane efflux protein.
  
   0.504
yibK
rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.495
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.