Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgra_2417Chitin-binding protein. (235 aa)    
Predicted Functional Partners:
Lgra_1429
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.578
Lgra_1556
Hypothetical protein.
  
     0.556
ddc
Pyridoxal-dependent decarboxylase.
       0.536
Lgra_3312
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.523
pta
Phosphate acetyl/butaryl transferase.
       0.520
ackA
Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.517
Lgra_1855
Transferase.
  
     0.500
hap
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
  
 0.473
proA_2
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
  
 0.471
Lgra_3347
Tn3 transposase DDE domain protein.
  
     0.466
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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