Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bolARegulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. (107 aa)    
Predicted Functional Partners:
grlA
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.900
pilE_2
Tfp pilus assembly protein, major type IV pilin class A; Belongs to the N-Me-Phe pilin family.
       0.644
dps2_2
DNA-binding protein; Belongs to the Dps family.
   
  
 0.532
dps2_1
Ferritin; Belongs to the Dps family.
   
  
 0.532
Lgra_2011
Hypothetical protein.
       0.443
gadC_3
Amino acid antiporter.
       0.443
Lgra_0243
Hypothetical protein.
  
     0.401
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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