Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgra_2640Tetrapyrrole methylase. (256 aa)    
Predicted Functional Partners:
Lgra_2641
Hypothetical protein.
       0.793
Lgra_0067
Initiator Replication protein.
  
     0.547
Lgra_0082
GNAT family acetyltransferase.
  
     0.513
Lgra_2639
Hypothetical protein.
       0.492
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
 
 0.473
Lgra_3346
GNAT family acetyltransferase.
  
     0.461
Lgra_1223
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.443
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 
 0.428
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.426
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
 
 0.423
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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