Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0038 | Lgra_2685 | Lgra_0038 | Lgra_2685 | Putative conjugative transfer protein TraF. | SCO1/SenC family transporter protein. | 0.795 |
Lgra_0038 | coxB | Lgra_0038 | Lgra_1116 | Putative conjugative transfer protein TraF. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.860 |
Lgra_0038 | petC | Lgra_0038 | Lgra_0696 | Putative conjugative transfer protein TraF. | Ubiquinol-cytochrome c oxydoreductase, cytochrome c1. | 0.412 |
Lgra_2681 | Lgra_2683 | Lgra_2681 | Lgra_2683 | SURF1 family protein. | Cytochrome c oxidase assembly protein. | 0.994 |
Lgra_2681 | Lgra_2685 | Lgra_2681 | Lgra_2685 | SURF1 family protein. | SCO1/SenC family transporter protein. | 0.780 |
Lgra_2681 | Lgra_3141 | Lgra_2681 | Lgra_3141 | SURF1 family protein. | Hypothetical protein. | 0.856 |
Lgra_2681 | coxB | Lgra_2681 | Lgra_1116 | SURF1 family protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.945 |
Lgra_2681 | ctaG | Lgra_2681 | Lgra_1114 | SURF1 family protein. | Cytochrome c oxidase assembly protein. | 0.955 |
Lgra_2681 | petC | Lgra_2681 | Lgra_0696 | SURF1 family protein. | Ubiquinol-cytochrome c oxydoreductase, cytochrome c1. | 0.644 |
Lgra_2683 | Lgra_2681 | Lgra_2683 | Lgra_2681 | Cytochrome c oxidase assembly protein. | SURF1 family protein. | 0.994 |
Lgra_2683 | Lgra_2685 | Lgra_2683 | Lgra_2685 | Cytochrome c oxidase assembly protein. | SCO1/SenC family transporter protein. | 0.832 |
Lgra_2683 | Lgra_3141 | Lgra_2683 | Lgra_3141 | Cytochrome c oxidase assembly protein. | Hypothetical protein. | 0.678 |
Lgra_2683 | coxB | Lgra_2683 | Lgra_1116 | Cytochrome c oxidase assembly protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.954 |
Lgra_2683 | ctaG | Lgra_2683 | Lgra_1114 | Cytochrome c oxidase assembly protein. | Cytochrome c oxidase assembly protein. | 0.964 |
Lgra_2683 | petC | Lgra_2683 | Lgra_0696 | Cytochrome c oxidase assembly protein. | Ubiquinol-cytochrome c oxydoreductase, cytochrome c1. | 0.870 |
Lgra_2685 | Lgra_0038 | Lgra_2685 | Lgra_0038 | SCO1/SenC family transporter protein. | Putative conjugative transfer protein TraF. | 0.795 |
Lgra_2685 | Lgra_2681 | Lgra_2685 | Lgra_2681 | SCO1/SenC family transporter protein. | SURF1 family protein. | 0.780 |
Lgra_2685 | Lgra_2683 | Lgra_2685 | Lgra_2683 | SCO1/SenC family transporter protein. | Cytochrome c oxidase assembly protein. | 0.832 |
Lgra_2685 | Lgra_3141 | Lgra_2685 | Lgra_3141 | SCO1/SenC family transporter protein. | Hypothetical protein. | 0.770 |
Lgra_2685 | ccmG | Lgra_2685 | Lgra_0186 | SCO1/SenC family transporter protein. | Cytochrome C biogenesis protein. | 0.828 |
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