Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lgra_2685SCO1/SenC family transporter protein. (213 aa)    
Predicted Functional Partners:
Lgra_2683
Cytochrome c oxidase assembly protein.
 
 0.950
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.945
Lgra_2681
SURF1 family protein.
 
 
 0.903
ctaG
Cytochrome c oxidase assembly protein.
 
 0.884
resA
Thiol-disulfide oxidoreductase.
 
 
 0.875
ctaB
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.820
Lgra_2682
Hypothetical protein.
 
     0.742
petC
Ubiquinol-cytochrome c oxydoreductase, cytochrome c1.
  
   
 0.734
rimK
Glutathione synthase, ribosomal protein S6 modification protein; Belongs to the RimK family.
       0.686
cc4
Cytochrome c4.
 
   
 0.658
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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