STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2685SCO1/SenC family transporter protein. (213 aa)    
Predicted Functional Partners:
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.958
resA
Thiol-disulfide oxidoreductase.
 
   0.956
Lgra_2683
Cytochrome c oxidase assembly protein.
 
 
 0.832
ccmG
Cytochrome C biogenesis protein.
  
   0.828
dipZ
Cytochrome C biogenesis protein.
  
   0.824
ctaG
Cytochrome c oxidase assembly protein.
 
 
 0.809
Lgra_0038
Putative conjugative transfer protein TraF.
   
   0.795
Lgra_2681
SURF1 family protein.
 
  
 0.780
Lgra_3141
Hypothetical protein.
    
 0.770
petC
Ubiquinol-cytochrome c oxydoreductase, cytochrome c1.
  
   
 0.739
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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