STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
icmMIcmM (DotJ). (94 aa)    
Predicted Functional Partners:
Lgra_2714
Protein IcmL (DotI).
     
 0.854
dotF
Component of the Dot/Icm secretion system.
     
 0.853
lphA
LphA (DotK).
     
 0.848
Lgra_2715
IcmK protein.
     
 0.765
dotG
IcmE/DotG protein.
     
 0.765
Lgra_2718
IcmC (DotE).
     
 0.756
icmV
Intracellular multiplication protein IcmV.
      
 0.738
icmD_5
IcmD (DotP).
     
 0.733
Lgra_2720
IcmJ protein.
     
 0.683
Lgra_0604
IcmF.
      
 0.665
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.