STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_2857Hypothetical protein. (334 aa)    
Predicted Functional Partners:
pepA
Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 0.893
holC
DNA polymerase III, chi subunit.
  
    0.843
spmA
Spore maturation protein A.
       0.728
spmB
AraC family transcriptional regulator.
       0.728
dotA
Defect in organelle trafficking protein DotA.
  
     0.702
Lgra_1032
Hypothetical protein.
  
     0.647
Lgra_2182
Enhanced entry protein EnhA.
  
     0.633
Lgra_1139
Putative helicase/relaxase.
  
     0.626
Lgra_0738
Secreted protein.
  
     0.593
Lgra_2922
Hypothetical protein.
  
     0.590
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.