Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lgra_2860Pyruvate phosphate dikinase. (1333 aa)    
Predicted Functional Partners:
npr
Phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr).
  
 0.980
Lgra_2054
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.826
Lgra_1193
Thaumatin domain-containing protein.
 
     0.748
Lgra_3031
Bile acid beta-glucosidase.
 
    0.731
oxdC
Oxalate decarboxylase OxdC.
  
     0.726
Lgra_1644
Ankyrin repeat protein.
 
     0.725
Lgra_3010
Hypothetical protein.
  
   
 0.714
Lgra_0664
CMP-N-acetylneuraminate monooxygenase.
 
  
 0.709
Lgra_3019
TraU protein.
  
     0.707
Lgra_3022
Exported membrane protein.
  
     0.705
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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