STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_3024Hypothetical protein. (218 aa)    
Predicted Functional Partners:
Lgra_3017
Membrane protein.
 
     0.951
Lgra_3018
Pilus retraction ATPase PilT.
 
     0.951
Lgra_3019
TraU protein.
 
     0.951
Lgra_3020
Type IV secretory protein VirB4 component.
 
     0.951
Lgra_3022
Exported membrane protein.
 
     0.951
Lgra_3023
Hypothetical protein.
 
     0.951
Lgra_3029
Hypothetical protein.
 
     0.949
Lgra_3031
Bile acid beta-glucosidase.
 
     0.949
Lgra_3033
Hypothetical protein.
 
     0.949
lvrA_2
Protein LvrA.
 
     0.939
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.