Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lgra_0035 | Lgra_0037 | Lgra_0035 | Lgra_0037 | Putative sex pilus assembly and mating pair protein TraG. | Putative conjugative transfer protein TrbB. | 0.951 |
Lgra_0035 | Lgra_0092 | Lgra_0035 | Lgra_0092 | Putative sex pilus assembly and mating pair protein TraG. | D12 class N6 adenine-specific DNA methyltransferase. | 0.771 |
Lgra_0035 | Lgra_0094 | Lgra_0035 | Lgra_0094 | Putative sex pilus assembly and mating pair protein TraG. | Phosphotransferase enzyme family protein. | 0.768 |
Lgra_0035 | Lgra_0128 | Lgra_0035 | Lgra_0128 | Putative sex pilus assembly and mating pair protein TraG. | Putative secreted esterase. | 0.771 |
Lgra_0035 | Lgra_0134 | Lgra_0035 | Lgra_0134 | Putative sex pilus assembly and mating pair protein TraG. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.769 |
Lgra_0035 | Lgra_3064 | Lgra_0035 | Lgra_3064 | Putative sex pilus assembly and mating pair protein TraG. | Hypothetical protein. | 0.709 |
Lgra_0035 | atpC_2 | Lgra_0035 | Lgra_3094 | Putative sex pilus assembly and mating pair protein TraG. | F-type H -transporting ATPase epsilon chain. | 0.452 |
Lgra_0035 | traI_2 | Lgra_0035 | Lgra_0032 | Putative sex pilus assembly and mating pair protein TraG. | Putative conjugative transfer protein TraI. | 0.879 |
Lgra_0037 | Lgra_0035 | Lgra_0037 | Lgra_0035 | Putative conjugative transfer protein TrbB. | Putative sex pilus assembly and mating pair protein TraG. | 0.951 |
Lgra_0037 | Lgra_0092 | Lgra_0037 | Lgra_0092 | Putative conjugative transfer protein TrbB. | D12 class N6 adenine-specific DNA methyltransferase. | 0.768 |
Lgra_0037 | Lgra_0094 | Lgra_0037 | Lgra_0094 | Putative conjugative transfer protein TrbB. | Phosphotransferase enzyme family protein. | 0.764 |
Lgra_0037 | Lgra_0128 | Lgra_0037 | Lgra_0128 | Putative conjugative transfer protein TrbB. | Putative secreted esterase. | 0.766 |
Lgra_0037 | Lgra_0134 | Lgra_0037 | Lgra_0134 | Putative conjugative transfer protein TrbB. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.760 |
Lgra_0037 | Lgra_3064 | Lgra_0037 | Lgra_3064 | Putative conjugative transfer protein TrbB. | Hypothetical protein. | 0.731 |
Lgra_0037 | traI_2 | Lgra_0037 | Lgra_0032 | Putative conjugative transfer protein TrbB. | Putative conjugative transfer protein TraI. | 0.879 |
Lgra_0092 | Lgra_0035 | Lgra_0092 | Lgra_0035 | D12 class N6 adenine-specific DNA methyltransferase. | Putative sex pilus assembly and mating pair protein TraG. | 0.771 |
Lgra_0092 | Lgra_0037 | Lgra_0092 | Lgra_0037 | D12 class N6 adenine-specific DNA methyltransferase. | Putative conjugative transfer protein TrbB. | 0.768 |
Lgra_0092 | Lgra_0094 | Lgra_0092 | Lgra_0094 | D12 class N6 adenine-specific DNA methyltransferase. | Phosphotransferase enzyme family protein. | 0.769 |
Lgra_0092 | Lgra_0128 | Lgra_0092 | Lgra_0128 | D12 class N6 adenine-specific DNA methyltransferase. | Putative secreted esterase. | 0.785 |
Lgra_0092 | Lgra_0134 | Lgra_0092 | Lgra_0134 | D12 class N6 adenine-specific DNA methyltransferase. | Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.773 |
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