Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
czcODimethylaniline monooxygenase. (436 aa)    
Predicted Functional Partners:
Lgra_3274
Hypothetical protein.
       0.792
fadH
2,4-dienoyl-CoA reductase.
     
 0.622
puo_2
Amine oxidase.
  
     0.590
xseA
Exonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.572
ptlI
Pentalenene oxygenase.
 
 0.552
Lgra_2069
Sterol desaturase-related protein.
 
     0.538
Lgra_3276
AraC family transcriptional regulator.
       0.533
lip2
Alpha/beta hydrolase.
 
 
  0.474
Lgra_2886
Hypothetical protein.
  
     0.411
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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