Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
blaIBlaI/MecI/CopY family transcriptional regulator. (132 aa)    
Predicted Functional Partners:
copA_1
Cation transport ATPase.
  
  
 0.708
pacS
Cation transport ATPase.
  
  
 0.708
penA_1
Cell division protein FtsI/penicillin-binding protein 2.
       0.700
bla_1
class-D beta-lactamase.
    
 0.600
ybdK_2
Carboxylate-amine ligase YbdK.
       0.429
Lgra_3377
cNMP binding domain-containing protein.
       0.424
ptpA
Prolyl tripeptidyl peptidase precursor.
  
     0.401
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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