STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lgra_3381LuxR family transcriptional regulator. (286 aa)    
Predicted Functional Partners:
bvgS
Sensory box histidine kinase/response regulator.
   
 0.956
arcB_3
Sensory histidine-kinase / response regulator.
   
 0.956
letS
Legionella transmission sensor LetS.
   
 0.933
evgS
Sensory box histidine kinase/response regulator.
  
 0.887
luxQ
Sensor histidine kinase.
  
 0.811
Lgra_0492
PPR repeat protein.
  
 0.730
Lgra_2849
PPR repeat protein.
  
 0.730
cheA
Chemotaxis histidine kinase.
  
 0.688
pleD_2
Regulatory protein (GGDEF domain).
  
 0.665
divK
Polar-differentiation response regulator DivK.
   
 0.655
Your Current Organism:
Legionella gratiana
NCBI taxonomy Id: 45066
Other names: ATCC 49413, CCUG 44894, CIP 105267, DSM 21233, L. gratiana, NCTC 12388, strain Lyon 8420412
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.