Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Llan_0101Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. (282 aa)    
Predicted Functional Partners:
Llan_0102
LphB.
 
    0.904
DprE1
Hypothetical protein.
 
  
 0.825
Llan_0245
Hypothetical protein.
 
    0.792
csaA
Chaperonin CsaA.
  
    0.639
Llan_0100
Substrate of the Dot/Icm secretion system.
       0.616
capD
Nucleoside-diphosphate sugar epimerase.
       0.612
Llan_1217
Hypothetical protein.
 
    0.555
lmxF_1
Multidrug efflux pump.
       0.522
KynB
Metal-dependent hydrolase.
       0.480
Llan_0128
Cytokinin oxidase.
 
  
 0.461
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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