STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fleQTranscriptional regulator FleQ. (469 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor (sigma-L); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.848
YlxH
Flagellar biosynthesis MinD.
 
 
 0.770
ZraS
Sensor kinase HydH.
 
 
 0.687
flgD
Flagellar basal body rod modification protein.
 
  
 0.663
ArcB_1
Sensory box sensor histidine kinase/response regulator.
  
 
 0.645
ArcB_2
Sensory box histidine kinase/response regulator.
  
 
 0.645
BarA_1
Sensory box histidine kinase/response regulator.
  
 
 0.645
LuxQ
Two-component sensor histidine kinase.
  
 
 0.599
Llan_0837
Hypothetical protein.
  
 
 0.586
BarA_2
Hypothetical protein.
  
 
 0.585
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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