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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Llan_0445Putative aldo/keto reductase family protein. (297 aa)    
Predicted Functional Partners:
HemL_2
Putative aminotransferase class-III.
 
     0.910
capD1
Polysaccharide biosynthesis protein CapD.
 
     0.848
ArnB_3
AHBA synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.838
SpsE
Putative N-acetylneuramic acid synthetase (NeuB).
 
     0.838
Llan_0451
Putative polysaccharide biosynthesis protein.
 
     0.830
KpsU
Putative glycosyltransferase.
 
     0.818
Llan_0449
Putative N-acetyltransferase.
 
     0.807
hisH-2
Putative imidazole glycerol phosphate synthase,glutamine amidotransferase subunit (HisH); IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.776
HisF_2
Putative imidazole glycerol phosphate synthase,cyclase subunit (HisF); IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.776
Llan_0446
LPS biosynthesis protein.
       0.773
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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