STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Llan_0785TraX protein. (238 aa)    
Predicted Functional Partners:
Llan_2151
SET domain protein.
  
     0.770
Llan_2495
Putative asmA protein.
  
     0.765
Llan_1507
Interaptin.
  
     0.747
Llan_0348
Hypothetical protein.
  
     0.732
Llan_1323
Two component response regulator.
  
     0.711
Llan_1223
Putative Methyltransferase.
  
     0.706
Llan_1799
Glycosyl transferase.
  
     0.631
Llan_1315
Transporter family transporter protein.
  
     0.630
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
  
     0.626
OsmY_1
Osmotically inducible protein Y.
  
     0.565
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.