Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrpRDNA-binding response regulator. (222 aa)    
Predicted Functional Partners:
qseC
Two component sensor kinase.
 
 0.998
ArcB_2
Sensory box histidine kinase/response regulator.
 
 
 0.965
ArcB_1
Sensory box sensor histidine kinase/response regulator.
 
 
0.947
BarA_1
Sensory box histidine kinase/response regulator.
 
 
0.945
BarA_2
Hypothetical protein.
 
 
 0.928
BarA_3
Hypothetical protein.
 
 
0.890
Llan_0837
Hypothetical protein.
  
 
 0.870
YciB
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.824
CpxA
Sensor histidine kinase CpxA.
 
 
 0.763
ZraS
Sensor kinase HydH.
 
 
 0.686
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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