STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_23-oxoacyl-ACP reductase. (288 aa)    
Predicted Functional Partners:
Llan_0801
SAM-dependent O-methyltransferase.
 
  
 
 0.642
Llan_0979
Hypothetical protein.
 
     0.564
Llan_0981
PRC-barrel domain protein.
 
     0.515
YnaI
Cyclic nucleotide-binding protein.
  
 0.464
ykoU
Putative ATP-dependent DNA ligase YkoU.
  
     0.437
fabD
Malonyl CoA-ACP transacylase.
 
 
 0.429
yueD
Sepiapterin reductase.
  
     0.418
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.