STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mdh_2Alcohol dehydrogenase. (384 aa)    
Predicted Functional Partners:
GabD1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.950
PuuA
Glutamine synthetase.
 
   
 0.940
Llan_1969
Glutamine amidotransferase, class I.
     
 0.845
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
  
 0.558
yjgB
Putative zinc-type alcohol dehydrogenase-like protein yjgB.
  
 
 0.515
yahK
Putative hydroxyacid dehydrogenase.
  
 
 0.515
AdhT
Alcohol dehydrogenase.
  
 
 0.515
Pta_2
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.505
Llan_1970
Hypothetical protein.
       0.498
Hcl
Acyl CoA synthetase, long chain fatty acid:CoA ligase.
     
 0.470
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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