STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Llan_1998Glycosyltransferase. (666 aa)    
Predicted Functional Partners:
Llan_0108
Protein kinase domain containing protein.
  
     0.636
Llan_0687
Cytochrome P450.
  
     0.599
Llan_1315
Transporter family transporter protein.
  
     0.582
Llan_1494
Protein kinase domain protein.
  
     0.578
aacA4
Aminoglycoside N (6')-acetyltransferase.
  
     0.549
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
  
     0.544
Llan_1695
Hypothetical protein.
  
     0.522
Llan_0102
LphB.
  
     0.502
Llan_0989
Hypothetical protein.
  
     0.500
Llan_2185
Fe-S protein.
  
     0.483
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.