STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TtgCOuter membrane efflux protein. (438 aa)    
Predicted Functional Partners:
YibH_2
Multidrug resistance efflux pump PmrA.
 
   0.961
TolC_1
Outer membrane protein TolC.
  
  
  0.911
BepF_4
Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.879
MdtC
Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.874
BepE_2
Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.869
acrA
Acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.869
BepF_2
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.851
acrB
Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.846
BepF_3
RND multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.802
Llan_1999
Hypothetical protein.
     
 0.801
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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