Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Llan_2153Hydrolase/acyltransferase. (262 aa)    
Predicted Functional Partners:
Llan_2154
Hypothetical protein.
       0.835
ugpC
Sn-glycerol-3-phosphate transport, ATP binding protein; Belongs to the ABC transporter superfamily.
       0.835
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
    0.835
ugpA
Sn-glycerol-3-phosphate transmembrane ABC transporter.
       0.835
fadE
acyl-CoA dehydrogenase.
  
  0.742
qor_1
Quinone oxidoreductase.
  
   0.733
Llan_2407
Transmembrane protein.
  
     0.604
Llan_2159
Hypothetical protein.
       0.539
Llan_1562
Putative signal peptide protein.
  
     0.486
MnmC
FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
  
 
  0.464
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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