STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpASn-glycerol-3-phosphate transmembrane ABC transporter. (293 aa)    
Predicted Functional Partners:
ugpC
Sn-glycerol-3-phosphate transport, ATP binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.999
ugpB
Glycerol-3-phosphate binding periplasmic protein.
 
 0.996
Llan_2154
Hypothetical protein.
  
  
 0.847
Llan_2153
Hydrolase/acyltransferase.
       0.800
fadE
acyl-CoA dehydrogenase.
       0.594
qor_1
Quinone oxidoreductase.
       0.594
Llan_2159
Hypothetical protein.
       0.539
ugpQ
Glycerophosphoryl diester esterase.
 
  
 0.469
cpdA
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA.
 
   
 0.432
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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