Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Llan_2166Dienelactone hydrolase family protein. (265 aa)    
Predicted Functional Partners:
Llan_2167
Cytochrome D1 heme domain protein.
 
     0.837
Llan_0962
Hypothetical protein.
  
     0.596
Llan_1428
Ankyrin repeats (3 copies).
  
 
   0.560
Llan_0275
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.552
enhA_5
Enhanced entry protein EnhA.
       0.473
choD
Cholesterol oxidase.
  
    0.419
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
 
   0.400
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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