Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OsmY_1Osmotically inducible protein Y. (184 aa)    
Predicted Functional Partners:
Llan_2200
Aromatic compounds catabolism.
       0.804
Llan_2201
Hypothetical protein.
       0.750
zapD
Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.720
Llan_2151
SET domain protein.
  
     0.699
fabA
(3R)-hydroxymyristoyl-ACP dehydratase.
  
     0.665
Llan_2204
Glutamate--cysteine ligase, GCS2.
 
    0.638
Llan_1507
Interaptin.
  
     0.625
Llan_1223
Putative Methyltransferase.
  
     0.618
Llan_2205
N-formylglutamate amidohydrolase.
 
     0.618
Llan_2281
Cysteine protease.
  
     0.612
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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