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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Llan_2385Bifunctional RNase H/acid phosphatase. (279 aa)    
Predicted Functional Partners:
Llan_0190
Hypothetical protein.
  
 
  0.775
Llan_1337
Hypothetical protein.
  
     0.701
Llan_1441
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.664
MsbA_1
ATP-binding transmembrane ABC transporter.
 
 
   0.584
Llan_0189
Flagellar motor protein MotB.
  
     0.541
Llan_2384
F-box-like protein.
       0.501
Ada_2
Transcription regulator protein.
 
   
 0.460
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.448
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
  
 0.448
Llan_2034
Hypothetical protein.
  
     0.435
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.