Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Llan_2437IcmL-like protein. (333 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase-like protein.
 
     0.855
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
       0.812
Llan_2287
Putative helicase/relaxase.
  
 
 
 0.793
dotA
Defect in organelle trafficking protein DotA.
  
     0.772
Llan_1613
Hypothetical protein.
  
     0.769
iraA_1
Small-molecule methyltransferase IraA.
  
     0.766
dotC
Defect in organelle trafficking lipoprotein DotC.
  
   
 0.766
TolC_2
Outer membrane efflux protein.
  
     0.765
Llan_2092
Protein IcmB (DotO).
  
     0.763
Llan_0989
Hypothetical protein.
  
  
 0.762
Your Current Organism:
Legionella lansingensis
NCBI taxonomy Id: 45067
Other names: ATCC 49751, CCUG 31227 B, CIP 103542, DSM 19556, L. lansingensis, NCTC 12830
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