STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Llon_0010TraU protein. (332 aa)    
Predicted Functional Partners:
Llon_0008
Membrane protein.
 
     0.961
Llon_0009
Pilus retraction ATPase PilT.
 
     0.961
Llon_0011
Type IV secretory protein VirB4 component.
 
     0.961
Llon_0013
Exported membrane protein.
 
     0.961
Llon_0014
Hypothetical protein.
 
     0.961
Llon_0020
Hypothetical protein.
 
     0.959
Llon_0021
Hypothetical protein.
 
     0.959
Llon_0022
Bile acid beta-glucosidase.
 
     0.959
Llon_0024
Hypothetical protein.
 
     0.959
Llon_0012
Hypothetical protein.
       0.838
Your Current Organism:
Legionella londiniensis
NCBI taxonomy Id: 45068
Other names: ATCC 49505, CCUG 44895, CIP 105269, L. londiniensis, NCTC 12374, NCTC:13722
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.