Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Llon_1502 | Llon_1503 | Llon_1502 | Llon_1503 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Translation factor; Belongs to the SUA5 family. | 0.716 |
Llon_1502 | Llon_1504 | Llon_1502 | Llon_1504 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | TrpH protein. | 0.716 |
Llon_1502 | Llon_1505 | Llon_1502 | Llon_1505 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Phosphate starvation-inducible protein PhoH. | 0.463 |
Llon_1502 | relA | Llon_1502 | Llon_1497 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.594 |
Llon_1502 | rluB | Llon_1502 | Llon_1499 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase); Belongs to the pseudouridine synthase RsuA family. | 0.800 |
Llon_1502 | rumA | Llon_1502 | Llon_1498 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 23S rRNA 5-methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.618 |
Llon_1502 | scpA | Llon_1502 | Llon_1501 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.813 |
Llon_1502 | scpB | Llon_1502 | Llon_1500 | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.800 |
Llon_1503 | Llon_1502 | Llon_1503 | Llon_1502 | Translation factor; Belongs to the SUA5 family. | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.716 |
Llon_1503 | Llon_1504 | Llon_1503 | Llon_1504 | Translation factor; Belongs to the SUA5 family. | TrpH protein. | 0.832 |
Llon_1503 | Llon_1505 | Llon_1503 | Llon_1505 | Translation factor; Belongs to the SUA5 family. | Phosphate starvation-inducible protein PhoH. | 0.479 |
Llon_1503 | relA | Llon_1503 | Llon_1497 | Translation factor; Belongs to the SUA5 family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.528 |
Llon_1503 | rluB | Llon_1503 | Llon_1499 | Translation factor; Belongs to the SUA5 family. | Ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase); Belongs to the pseudouridine synthase RsuA family. | 0.724 |
Llon_1503 | rumA | Llon_1503 | Llon_1498 | Translation factor; Belongs to the SUA5 family. | 23S rRNA 5-methyluridine methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.539 |
Llon_1503 | scpA | Llon_1503 | Llon_1501 | Translation factor; Belongs to the SUA5 family. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.716 |
Llon_1503 | scpB | Llon_1503 | Llon_1500 | Translation factor; Belongs to the SUA5 family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.721 |
Llon_1504 | Llon_1502 | Llon_1504 | Llon_1502 | TrpH protein. | Tryptophanyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.716 |
Llon_1504 | Llon_1503 | Llon_1504 | Llon_1503 | TrpH protein. | Translation factor; Belongs to the SUA5 family. | 0.832 |
Llon_1504 | Llon_1505 | Llon_1504 | Llon_1505 | TrpH protein. | Phosphate starvation-inducible protein PhoH. | 0.502 |
Llon_1504 | korA | Llon_1504 | Llon_0624 | TrpH protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.675 |
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