Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Llon_1985Spermidine synthase. (454 aa)    
Predicted Functional Partners:
Llon_0761
Hydrolase.
     
  0.567
Llon_1200
Spermidine synthase.
 
  
  0.554
Llon_1020
Spermidine synthase.
 
  
  0.536
tphB
Proline/glycine betaine transporter-like protein.
       0.488
xapA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.478
lysAC_2
Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.467
argD
Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.456
Llon_0636
Amine oxidase.
   
 
  0.454
yfiH
Laccase domain protein YfiH; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.447
Llon_0335
Putative hydrolase.
     
  0.446
Your Current Organism:
Legionella londiniensis
NCBI taxonomy Id: 45068
Other names: ATCC 49505, CCUG 44895, CIP 105269, L. londiniensis, NCTC 12374, NCTC:13722
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